abstract：Background:Methylenetetrahydrofolate reductase (MTHFR) is indispensable for the conversion of homocysteine (Hcy) to methionine. The single nucleotide polymorphism (SNP) of MTHFR gene (rs1801133, C667T) is correlated with decreased enzyme activity that eventually results in elevated plasma Hcy levels. Hyperhomocysteinem...

journal_title：PeerJ

authors： Yuan H,Fu M,Yang X,Huang K,Ren X

更新日期：2020-02-20 00:00:00

abstract：:The MYB transcription factor family is one of the largest gene families playing regulatory roles in plant growth and development. The MYB family has been studied in a variety of plant species but has not been reported in Taxus chinensis. Here we identified 72 putative R2R3-MYB genes in T. chinensis using a comprehensi...

journal_title：PeerJ

authors： Hu X,Zhang L,Wilson I,Shao F,Qiu D

更新日期：2020-02-17 00:00:00

abstract：:Several data loggers deployed to monitor temperature and humidity of Crocodylus acutus (American crocodile) nests in South Florida could not be located after hatching. One badly damaged data logger was retrieved, providing insight into the possible fate of the others. Using a taphonomic approach, we identified numerou...

journal_title：PeerJ

authors： Drumheller SK,Nestler JH,Hackett Farris CE,Farris SC,Mazzotti FJ

更新日期：2020-02-17 00:00:00

abstract：:This article is a presentation of taxonomic diversity of the orchid genus Cyrtochilum in Northwestern South America. The morphological characteristics of over 90 species occurring in northern Peru, Ecuador, Colombia and Venezuela are presented together with illustrations of their floral segments. Information about the...

journal_title：PeerJ

authors： Szlachetko DL,Kolanowska M

更新日期：2020-02-14 00:00:00

abstract：:"Higher" termites have been able to colonize all tropical and subtropical regions because of their ability to digest lignocellulose with the aid of their prokaryotic gut microbiota. Over the last decade, numerous studies based on 16S rRNA gene amplicon libraries have largely described both the taxonomy and structure o...

journal_title：PeerJ

authors： Hervé V,Liu P,Dietrich C,Sillam-Dussès D,Stiblik P,Šobotník J,Brune A

更新日期：2020-02-13 00:00:00

abstract：Background:Inflammatory bowel diseases are associated with remodeling of neuronal circuitries within the enteric nervous system, occurring also at sites distant from the acute site of inflammation and underlying disturbed intestinal functions. Homeoproteins orthodenticle OTX1 and OTX2 are neuronal transcription factors...

journal_title：PeerJ

authors： Bistoletti M,Micheloni G,Baranzini N,Bosi A,Conti A,Filpa V,Pirrone C,Millefanti G,Moro E,Grimaldi A,Valli R,Baj A,Crema F,Giaroni C,Porta G

更新日期：2020-02-13 00:00:00

abstract：:Histone deacetylases (HDACs) are key epigenetic factors in regulating chromatin structure and gene expression in multiple aspects of plant growth, development, and response to abiotic or biotic stresses. Many studies on systematic analysis and molecular function of HDACs in Arabidopsis and rice have been conducted. Ho...

journal_title：PeerJ

authors： Zhang K,Yu L,Pang X,Cao H,Si H,Zang J,Xing J,Dong J

更新日期：2020-02-12 00:00:00

abstract：:Pancreatic adenocarcinoma (PAAD), the most common subtype of pancreatic cancer, is a highly lethal disease. In this study, we integrated the expression profiles of splicing factors (SFs) of PAAD from RNA-sequencing data to provide a comprehensive view of the clinical significance of SFs. A prognostic index (PI) based ...

journal_title：PeerJ

authors： Rong MH,Zhu ZH,Guan Y,Li MW,Zheng JS,Huang YQ,Wei DM,Li YM,Wu XJ,Bu HP,Peng HL,Wei XL,Li GS,Li MX,Chen MH,Huang SN

更新日期：2020-02-11 00:00:00

abstract：Background:The gray snapper (Lutjanus griseus) has a tropical and subtropical distribution. In much of its range this species represents one of the most important fishery resources because of its high quality meat and market value. Due to this, this species is vulnerable to overfishing, and population declines have bee...

journal_title：PeerJ

authors： Rosado-Nic OJ,Hogan JD,Lara-Arenas JH,Rosas-Luis R,Carrillo L,Villegas-Sánchez CA

更新日期：2020-02-10 00:00:00

abstract：Introduction:Human papillomavirus (HPV) is the most common sexually transmitted infection (STI) worldwide. Despite recommendations for HPV vaccination of young women from health authorities, parental concerns were raised whether vaccination could induce unsafe sexual behaviour in young women. Therefore, the primary aim...

journal_title：PeerJ

authors： Soudeyns C,Speybroeck N,Brisson M,Mossong J,Latsuzbaia A

更新日期：2020-02-10 00:00:00

abstract：:Grafting is one of the most widely used methods for vegetative propagation, particularly for multiplying trees considered important, but there has been little research done on the effect of hybridization on grafts from the genus Pinus. Sometimes hybrids show the ability to reproduce and adapt efficiently to the enviro...

journal_title：PeerJ

authors： Pérez-Luna A,Wehenkel C,Prieto-Ruíz JÁ,López-Upton J,Hernández-Díaz JC

更新日期：2020-02-07 00:00:00

abstract：:Diffuse sources of pollution like agricultural or urban runoff are important factors in determining the quality of surface waters, although they are more difficult to monitor than point sources. The objective of our study was to verify assumptions that the inflow from agricultural nutrient sources is higher than from ...

journal_title：PeerJ

authors： Matej-Lukowicz K,Wojciechowska E,Nawrot N,Dzierzbicka-Głowacka LA

更新日期：2020-02-06 00:00:00

abstract：Background:Human sapovirus (SaV) is an etiologic agent of acute gastroenteritis (AGE) in all age groups worldwide. Genetic recombination of SaV has been reported from many countries. So far, none of SaV recombinant strain has been reported from Thailand. This study examined the genetic recombination and genotype divers...

journal_title：PeerJ

authors： Kumthip K,Khamrin P,Ushijima H,Chen L,Li S,Maneekarn N

更新日期：2020-02-06 00:00:00

abstract：Background:Riparian corridors can affect nutrient, organic matter, and sediment transport, all of which shape water quality in streams and connected downstream waters. When functioning riparian corridors remain intact, they provide highly valued water quality ecosystem services. However, in rapidly urbanizing watershed...

journal_title：PeerJ

authors： Atkinson SF,Lake MC

更新日期：2020-02-04 00:00:00

abstract：Background:Oral squamous cell carcinoma (OSCC) is a major lethal malignant cancer of the head and neck region, yet its molecular mechanisms of tumourigenesis are still unclear. Patients and methods:We performed weighted gene co-expression network analysis (WGCNA) on RNA-sequencing data with clinical information obtain...

journal_title：PeerJ

authors： Hu X,Sun G,Shi Z,Ni H,Jiang S

更新日期：2020-02-04 00:00:00

abstract：Aim:We aimed to translate and cross-culturally adapt the International Knee Documentation Committee-subjective knee form (IKDC) in Romanian. Method:The original (US) IKDC-subjective knee form was translated according to recommended guidelines. Validity was tested using Spearmans's correlation coefficient between score...

journal_title：PeerJ

authors： Todor A,Vermesan D,Haragus H,Patrascu JM Jr,Timar B,Cosma DI

更新日期：2020-02-03 00:00:00

abstract：:Kenaf (Hibiscus cannabinus L.) is a fibrous crop, grown in tropical climate having huge biomass and can be a good candidate for the phytoremediation of different heavy metals. Consequently, the present study was conducted to explore morpho-physiological traits, photosynthetic pigments, gaseous exchange attributes, ant...

journal_title：PeerJ

authors： Saleem MH,Fahad S,Rehman M,Saud S,Jamal Y,Khan S,Liu L

更新日期：2020-01-30 00:00:00

abstract：:Here we present the first two complete plastid genomes for Brunelliaceae, a Neotropical family with a single genus, Brunellia. We surveyed the entire plastid genome in order to find variable cpDNA regions for further phylogenetic analyses across the family. We sampled morphologically different species, B. antioquensis...

journal_title：PeerJ

authors： Valencia-D J,Murillo-A J,Orozco CI,Parra-O C,Neubig KM

更新日期：2020-01-28 00:00:00

abstract：:Banana streak virus (BSV) belongs to the members of the genus Badnavirus, family Caulimoviridae. At present, BSV contains nine species in the International Committee on Taxonomy of Viruses (ICTV) classification report (2018b release). Previous study indicated that the viral particles of Banana streak virus Acuminata Y...

journal_title：PeerJ

authors： Li WL,Yu NT,Wang JH,Li JC,Liu ZX

更新日期：2020-01-27 00:00:00

abstract：:The most intense commercial harvest of marine aquarium species in North America occurs in the coastal waters surrounding Florida, yet very often little information exists on the life histories, population dynamics, or reproductive characteristics of these organisms. The peppermint shrimp Lysmata boggessi is one such s...

journal_title：PeerJ

authors： Dickson MD,Behringer DC,Baeza JA

更新日期：2020-01-23 00:00:00

abstract：Background:BRCA1 and BRCA2 genes are currently proven to be closely related to high lifetime risks of breast cancer. To date, the closely related genes to BRCA1/2 mutations in breast cancer remains to be fully elucidated. This study aims to identify the gene expression profiles and interaction networks influenced by BR...

journal_title：PeerJ

authors： Li Y,Zhou X,Liu J,Yin Y,Yuan X,Yang R,Wang Q,Ji J,He Q

更新日期：2020-01-21 00:00:00

abstract：:Forest soils sequester a large amount of carbon (C) and have a significant effect on the global C balance. Forests are commonly managed to maintain certain age structures but the effects of this management on soil C pools (kg C m-2) is still uncertain. We compared 40-year-old (1GF) and 24-year-old (2GF) plantations of...

journal_title：PeerJ

authors： Ma J,Han H,Cheng X

更新日期：2020-01-21 00:00:00

abstract：:Pseudogymnoascus destructans (Pd), the causative agent of white-nose syndrome in bats (WNS), has led to dramatic declines of bat populations in eastern North America. In the spring of 2016, WNS was first detected at several locations in Washington State, USA, which has prompted the need for large scale surveillance ef...

journal_title：PeerJ

authors： Urbina J,Chestnut T,Schwalm D,Allen J,Levi T

更新日期：2020-01-20 00:00:00

abstract：:Plasma membrane NADPH oxidases, also named respiratory burst oxidase homologues (Rbohs), play pivotal roles in many aspects of growth and development, as well as in responses to hormone signalings and various biotic and abiotic stresses. Although Rbohs family members have been identified in several plants, little is k...

journal_title：PeerJ

authors： Zhang G,Yue C,Lu T,Sun L,Hao F

更新日期：2020-01-17 00:00:00

abstract：:Epidemiological studies of low prevalence disease problems are often hindered by the high cost of diagnostic testing. The objective of this study was to evaluate PCR screening of both individual and pooled fecal samples from culled dairy cows for the invA gene of Salmonella followed by culture to determine if the sens...

journal_title：PeerJ

authors： Adaska JM,Ekong PS,Clothier KA,Williams DR,Rossitto PV,Lehenbauer TW,Atwill ER,Li X,Aly SS

更新日期：2020-01-15 00:00:00

abstract：:Sugarcane Bacilliform Guadeloupe A Virus (SCBGAV, genus Badnavirus, family Caulimoviridae) is an emerging, deleterious pathogen of sugarcane which presents a substantial barrier to producing high sugarcane earnings. Sugarcane bacilliform viruses (SCBVs) are one of the main species that infect sugarcane. During the las...

journal_title：PeerJ

authors： Ashraf F,Ashraf MA,Hu X,Zhang S

更新日期：2020-01-13 00:00:00

abstract：:Paratya australiensis Kemp (Decapoda: Atyidae) is a widely distributed freshwater shrimp in eastern Australia. The species has been considered as an important stream organism for studying genetics, dispersal, biology, behaviour and evolution in atyids and is a major food source for stream dwelling fishes. Paratya aust...

journal_title：PeerJ

authors： Rahman S,Schmidt D,Hughes JM

更新日期：2020-01-09 00:00:00

abstract：:Healthy, older adults are widely reported to experience cognitive decline, including impairments in inhibitory control. However, this general proposition has recently come under scrutiny because ageing effects are highly variable between individuals, are task dependent, and are sometimes not distinguished from general...

journal_title：PeerJ

authors： Knox PC,Pasunuru N

更新日期：2020-01-09 00:00:00

abstract：Background:Previous studies have indicated that physical exercise enhances attentional function; however, the relationship between exercise mode and attentional networks has not been clarified for older adults (>60 years old). This study aimed to investigate the relationship between attentional networks and different e...

journal_title：PeerJ

authors： Wang B,Guo W

更新日期：2020-01-07 00:00:00

abstract：:Structural variants (SVs) are an important class of genetic variation implicated in a wide array of genetic diseases including cancer. Despite the advances in whole genome sequencing, comprehensive and accurate detection of SVs in short-read data still poses some practical and computational challenges. We present sv-c...

journal_title：PeerJ

authors： Kuzniar A,Maassen J,Verhoeven S,Santuari L,Shneider C,Kloosterman WP,de Ridder J

更新日期：2020-01-06 00:00:00

abstract：:We describe a new species of Oligodon from the highlands of the Langbian Plateau, southern Truong Son Mountains, Vietnam, based on morphological and molecular phylogenetic analyses. The new species, Oligodon rostralissp. nov is distinguished from its congeners by the following morphological characters: medium size in ...

journal_title：PeerJ

authors： Nguyen HN,Tran BV,Nguyen LH,Neang T,Yushchenko PV,Poyarkov NA

更新日期：2020-01-06 00:00:00

abstract：Background:The aim of the study was to evaluate the treatment outcomes of endoscopic prelacrimal recess approaches (EPLAs) in managing different sinus pathologies, analyzing associated adverse events and post-treatment quality-of-life. Methods:We enrolled 21 consecutive patients (22 lesions) who received endoscopic si...

journal_title：PeerJ

authors： Lin YH,Chen WC

更新日期：2020-01-03 00:00:00

abstract：:A new p-terphenyl derivative 4″-deoxy-2'-methoxyterphenyllin (1), along with six known p-terphenyl derivatives (2-7), a known flavonoid derivative dechlorochlorflavonin (8) and a known fellutanine A (9), were isolated from the insect-derived strain of the fungus Aspergillus candidus Bdf-2, associated with Blaptica dub...

journal_title：PeerJ

authors： Shan T,Wang Y,Wang S,Xie Y,Cui Z,Wu C,Sun J,Wang J,Mao Z

更新日期：2020-01-02 00:00:00

abstract：:Stridulatory signals are involved in conspecific interactions between bark beetles (Coleoptera: Curculionidae, Scolytinae). In this study, we compared the qualitative profiles of acoustic signals in three species from the genus Polygraphus Er. Sympatry can be periodically observed in two of them -P. proximus and P. su...

journal_title：PeerJ

authors： Kerchev IA

更新日期：2020-01-02 00:00:00

abstract：:There has been an increase in the mortality rate and morbidity of kidney cancer (KC) with kidney renal clear cell carcinoma (KIRC) being the most common subtype of KC. GRAMD1C (GRAM Domain Containing 1C) has not been reported to relate to prognosis and immunotherapy in any cancers. Using bioinformatics methods, we jud...

journal_title：PeerJ

authors： Hao H,Wang Z,Ren S,Shen H,Xian H,Ge W,Wang W

更新日期：2019-12-20 00:00:00

abstract：:We describe Atrimitra isolata sp. n. (Gastropoda: Mitridae), collected on the summit of seamounts (~200 m water depth) in the vicinity of Desventuradas Islands, Chile insular territory. Additionally, we provide some insight into the habitat of this new species based on underwater imagery taken with a remotely operated...

journal_title：PeerJ

authors： Sellanes J,Salisbury RA,Tapia JM,Asorey CM

更新日期：2019-12-20 00:00:00

abstract：:Wild edible mushrooms have been collected and consumed by human groups for centuries, and today they represent a relevant source of food and income for many rural families worldwide. Preserving these non-timber forest products is of great interest, and there is concern about the damage caused by intensive mushroom har...

journal_title：PeerJ

authors： Ruiz-Almenara C,Gándara E,Gómez-Hernández M

更新日期：2019-12-18 00:00:00

abstract：Background:G. boninense is a hemibiotrophic fungus that infects oil palms (Elaeis guineensis Jacq.) causing basal stem rot (BSR) disease and consequent massive economic losses to the oil palm industry. The pathogenicity of this white-rot fungus has been associated with cell wall degrading enzymes (CWDEs) released durin...

journal_title：PeerJ

authors： Ramzi AB,Che Me ML,Ruslan US,Baharum SN,Nor Muhammad NA

更新日期：2019-12-18 00:00:00

abstract：Background:Complement factor C3 represents the central component of the complement cascade and its activation split product C3a plays an important role in inflammation and disease. Many human disorders are linked to dysregulation of the complement system and alteration in interaction molecules. Therefore, various thera...

journal_title：PeerJ

authors： Winnicki W,Pichler P,Mechtler K,Imre R,Steinmacher I,Sengölge G,Knafl D,Beilhack G,Wagner L

更新日期：2019-12-16 00:00:00

abstract：Background:Although the postural instability accompanying bilateral vestibular loss in human and quadrupeds during lateral head movements are well-known, it is still unclear whether or not lateral head turns would indeed activate the postural control system to maintain balance. This study aimed to examine the kinetic p...

journal_title：PeerJ

authors： Song Y,Wang M,Baker JS,Gu Y

更新日期：2019-12-12 00:00:00